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Ruth H. Carmichael, Ph.D.

Senior Marine Scientist
Assistant Professor of Marine Science, University of South Alabama


Ph.D., Boston University, 2004


Email
Curriculum Vitae

 

Marine Ecosystem Response

Research Interests          
                                                 Lab website 

My research focuses on marine ecosystem responses; understanding relationships between organisms and their environment and specific biological and physiological responses to environmental change.  In particular, I am interested in the mechanisms by which anthropogenic-driven perturbations affect coastal habitats and species.  I give special focus to commercially important coastal bivalves and horseshoe crabs.  

I use a variety of approaches to make these assessments.  I measure how perturbations affect habitat and food quality for consumers, and then determine the extent to which these effects may be transferred up coastal food webs in terms of change in growth, survival, and physiology.  I also employ natural abundance stable isotopes to trace N and C sources from consumers to their food sources and ultimately to N and C sources from land.  I use this information to discern trophic interactions, define linkages between anthropogenic factors and organism responses, assess nutritional importance of food sources, discern physiological state of organisms, and historically trace responses to environmental change.

Specific Research Topic

  1. Population ecology of West Indian manatees in Alabama waters

    a. A model for conservation management by integration of
        research and public outreach


    b. Use of telemetry and GPS to monitor West Indian manatee
        movements in Alabama waters


    c.  Use of tagging and necropsy data to define movements and
         diet of Alabama manatees

  2. Factors affecting ecology and physiology of bivalves in nGOM waters (and elsewhere)

    a. Use of N stable isotope ratios in bivalve shell to trace anthropogenic
        N sources.

    b. Effects of N enrichment on oyster growth and survival in Mobile Bay, AL

    c. Use of stable isotope ratios to ink wastewater sources to effects on
        shellfish and human health:  Defining relevant and effective spatial and
        temporal scales for management

  3. The trophic importance of land-driven organic matter

  4. Using molts to evaluate fringe horseshoe crab populations in Downeast
    Maine and the northern Gulf of Mexico

  5. Development and integration of metadata and research data retention
    at DISL

Courses

Selected Current Research Grants

2009 -2011

Alabama Oyster Reef Restoration Program, University of South Alabama, Quantification of direct and indirect nitrogen removal by oysters (Crassostrea virginica) (Co-PI) 

2009 - 2011

Shelby Center, From Mobile Bay to nGOM fisheries: The trophic importance of land-derived organic matter (PI) 

2009 - 2010

Alabama Division of Conservation and Natural Resources, Linking nutrient source to harmful algal blooms in Little Lagoon, AL  (Co-PI) 

2009 - 2010

Alabama Division of Wildlife and Freshwater Fisheries, Population Ecology of West Indian manatees in Alabama waters (PI) 

2009 - 2010

NOAA/NCDDC, Data Management in Support of NOAA’s Integrated Ecosystem Assessment for the Gulf of Mexico through the NGI Ecosystem Data Assembly Center (PI) 

2008 - 2010

MS-AL Sea Grant Consortium, Use of stable isotope ratios to link wastewater sources to effects on shellfish and human health: Defining relevant and effective spatial and temporal scales for management (PI) 

   

Past Research Grants

2008 - 2009

Alabama Division of Wildlife and Freshwater Fisheries, Use of telemetry and GPS to monitor West Indian manatee movements in Alabama waters (PI) 

2008 - 2009

Mobile Bay National Estuary Program, Study of the West Indian manatee population in Mobile Bay, AL: A model for conservation management by integration of research and public outreach (PI) 

2007 - 2009

NOAA/NCDDC, Development and integration of metadata and research data retention at Dauphin Island Sea Lab (Co-PI) 

2007 - 2009

Alabama Oyster Reef Restoration Program, Univ. of South Alabama, Effects of N enrichment on oyster growth and survival via changes in food supply and habitat in Mobile Bay, AL (PI) 

2007 - 2008

Alabama Division of Wildlife and Freshwater Fisheries, A pilot study of the extralimital West Indian Manatee population in Mobile Bay, AL (PI)

   

Selected Publications

2010

Kovacs, C., J. Daskin, H. Patterson, and R. H. Carmichael. Crassostrea
             virginica
shells record local variation in wastewater inputs to a coastal
             estuary. Aquatic Biol. 9:77-84.

Carmichael, R. H. and C. Kovacs. Comment on Watanabe et al. 2009.
             Mar. Pollut. Bull. 60: 314-315.

2009

Pabody, C., R. H. Carmichael, L. Rice, and M. Ross.  West Indian manatees in
            Mobile Bay, Alabama:  A new sighting network adds to twenty years of
            historical data on extralimital populations. Gulf Mexico Sci. 27:52-61.

Carmichael, R. H., E. Gaines, Z. Sheller, A. Tong, A. Clapp, and I. Valiela. Diet
            composition of juvenile horseshoe crabs: Implications for growth and
            survival of natural and cultured stocks, p. 521-534. In J. Tanacredi, M.
            Botton, D. Smith [eds.], Biology and conservation of horseshoe crabs.
            Springer, New York.

2008

Carmichael, R. H., T. Hattenrath, I. Valiela, R. H. Michener. Nitrogen stable
            isotopes in the shell of Mercenaria mercenaria trace wastewater inputs
            from watersheds to estuarine ecosystems. Aquatic Biol. 4:99-111. pdf

Daskin, J. H., K. Calci, W. Burkhardt, III, and R. Carmichael. Use of N stable
            isotope and alternative microbial analysis to define wastewater influence in
            Mobile Bay, AL. Mar. Pollut. Bull. 56:860-868.

2007

Bowen, J., K. Kroeger, G. Tomasky, W. J. Pabich, , M. L. Cole, R. H. Carmichael,
            I. Valiela. A review of land-estuary coupling by groundwater discharge to
            New England estuaries:  Mechanisms and effects. Applied Geochemistry.
            22: 175-191.

2005

Carmichael, R. H. and I. Valiela. Coupling of near-bottom seston and surface
            sediment composition: Changes with nutrient enrichment and implications
            for estuarine food supply and biogeochemical processing.  Limnol.
            Oceanogr.
50: 97-105.

2004

Carmichael, R. H., A. Shriver, and I. Valiela. Changes in shell and soft tissue
            growth, tissue composition, and survival of quahogs, Mercenaria
            mercenaria
, and softshell clams, Mya arenaria, in response to eutrophic-
            driven changes in food supply and habitat. J. Exp. Mar. Biol. Ecol. 313:
            75-104.

Rutecki, D., R. H. Carmichael, and I. Valiela.  Magnitude of harvest of Atlantic
            horseshoe crabs, Limulus polyphemus, in Pleasant Bay, MA.  Estuaries 27:
            179-187.

Carmichael, R. H., B. Annette, and I. Valiela. N loading to Pleasant Bay, Cape
            Cod:  Application of models and stable isotopes to detect incipient nutrient
            enrichment of estuaries.  Mar. Pollut. Bull. 48: 137-143.

Carmichael, R. H., D. Rutecki, B. Annett, E. Gaines, and I. Valiela.  Position of
            horseshoe crabs in estuarine food webs: N and C stable isotopic study of
            foraging ranges and diet composition. J. Exp. Mar. Biol. Ecol. 299:
            231-253.

2003

Carmichael, R. H., D. Rutecki, and I. Valiela.  Abundance and population structure
           of the Atlantic horseshoe crab, Limulus polyphemus, in Pleasant Bay, Cape
           Cod.  Mar. Ecol. Prog. Ser. 246: 225-239.

 

Current Graduate Students Post Doctoral Associates

Technicians


Heather Patterson, Ph.D.
Allen Aven, Ph.D.

 


Nicole Taylor

 

 

 

 

 

 

 

 

 

 

 
 
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